AMG-PERK-44

AMG-PERK-44 : Inhibitor of EIF2AK3

Structure

Information

  • EIF2AK3
  • Inhibitor
  • 1 µM
  • Reviewer recommended concentration: 10 mg/kg for in vivo use

In Vitro Validations

Uniprot ID: Q9NZJ5
Target Class: Kinase
Target SubClass: Other
Potency: IC50
Potency Value: 6 nM
Potency Assay: TR-FRET assay (using 1 µM ATP (=Km), Cisbio Inc.)
PDB ID for probe-target interaction (3D structure): 4X7N
Target aliases:
Eukaryotic translation initiation factor 2-alpha k ...

DOI Reference: 10.1021/jm5017494

In Cell Validations

In Vivo Data

Off-Target Selectivity Assesments

Off Target: EIF2AK4
Potency end-point : IC50 7300 nM
Potency assay (off target): TR-FRET assay (using 120 µM ATP (= 0.66 x Km), Cisbio Inc.)
Probe Selectivity in Vitro:
Screened at 1 µM against 387 kinases, KINOMEscan (DiscoveRx). Clean selectivity profile, no target within 50% of control. Full screening data are available as supporting information, PMID: 25587754
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SERP ratings and comments


SERP Ratings

In Cell Rating
In Model Organisms

SERP Comments:

Compound 44 exhibits impressive potency and selectivity as an inhibitor of PERK, making it a valuable tool for elucidating PERK’s role in cellular signaling. Notably, Compound 44 offers chemical diversity and greater selectivity compared to previously known PERK inhibitors like GSK2606414 and GSK2656157. Its design is supported by CADD methods, with the X-ray crystal structure of PERK in complex with Compound 44 (PDB accession code: 4X7N), ensuring an optimized fit within the PERK active site. This careful optimization contributes to its potency and specificity, as demonstrated in kinase selectivity profiling when against a panel of 387 kinases. In cellular models, Compound 44 has shown potent PERK inhibition (in vitro IC50 = 6 nM) with over 1,000-fold selectivity against GCN2, and no observable GCN2-related effects in cellular assays. While the compound’s pharmacokinetic properties in rats were moderate, its pharmacokinetics in mice were significantly improved. However, one significant limitation is the lack of data regarding Compound 44’s efficacy in disease models. Although it’s in vitro potency and selectivity make it a strong candidate for PERK-related studies, more data on pharmacokinetics, toxicity, and therapeutic efficacy in animal models are necessary to fully assess its suitability for in vivo applications.

(last updated: 21 Oct 2024 )

SERP Ratings

In Cell Rating
In Model Organisms

SERP Comments:

AMG-PERK-44 is an excellent chemical probe for PERK, with absolute selectivity for PERK relative to >370 other kinases and a structurally validated ATP-competitive binding mode. AMG-PERK-44 is the most selective PERK inhibitor in the literature and can be confidently deployed for in vitro and in vivo studies. AMG-PERK-44 is less potent than the related probes from Axten (GSK2606414 & GSK2656157), does not come with a matched negative control, and contains a PAINS structural alert (aniline), all factors that lower its score slightly to three stars. I would recommend the use of AMG-PERK-44 alongside one of the structurally distinct Axten compounds to confirm on-target phenotypes in the absence of a matched negative control.

(last updated: 26 Nov 2024 )